BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E01SP1|AL428729
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1803 1746 0.0
>3x_Contig1803
Length = 52241
Score = 1746 bits (878), Expect = 0.0
Identities = 882/886 (99%)
Strand = Plus / Minus
Query: 1 atcaacatgttcgtcatgaataaggcatggtaagctctagcacaaaccactctgaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19655 atcaacatgttcgtcatgaataaggcatggtaagctctagcacaaaccactctgaccttg 19596
Query: 61 attctgtaacgaggatcccagccagcataagcatcaacaatgtaaatgtgatccctagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19595 attctgtaacgaggatcccagccagcataagcatcaacaatgtaaatgtgatccctagtt 19536
Query: 121 ctcaagtaatcagcagctctttctctgttaatttcccaagttctttcggaacatggctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19535 ctcaagtaatcagcagctctttctctgttaatttcccaagttctttcggaacatggctta 19476
Query: 181 tttactggaccccaccaaacgttatcctttgaagtttcttcttcaacgatacgcttatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19475 tttactggaccccaccaaacgttatcctttgaagtttcttcttcaacgatacgcttatca 19416
Query: 241 cgtggagatcttccggtcttatcaccagagtaggcaatcaaggcaccagcattggaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19415 cgtggagatcttccggtcttatcaccagagtaggcaatcaaggcaccagcattggaaatg 19356
Query: 301 gctgtgtctctttcttttaaagcatcttcatataacaaagcagctggagcattacgtctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19355 gctgtgtctctttcttttaaagcatcttcatataacaaagcagctggagcattacgtctg 19296
Query: 361 awggtgacgacttctgcagaaaggccaagctcagccctaatattctcttcagcagaattt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19295 atggtgacgacttctgcagaaaggccaagctcagccctaatattctcttcagcagaattt 19236
Query: 421 tgtgtcttagttggtgacattatttgawaawaggttttattttctttctttttagtcgcg 480
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 19235 tgtgtcttagttggtgacattatttgataataggttttattttctttctttttagtcgcg 19176
Query: 481 ctagaggaaaagtcgataacacggttaattgagtattcttaaatggagaagagtcaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19175 ctagaggaaaagtcgataacacggttaattgagtattcttaaatggagaagagtcaattt 19116
Query: 541 atcgtatagtatgaatwttggctttactattaaagtgctttcaatgtgtagaatcactga 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19115 atcgtatagtatgaattttggctttactattaaagtgctttcaatgtgtagaatcactga 19056
Query: 601 attttgggtttacttttattgcaatacaactgagataatatatagctactattgtacctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19055 attttgggtttacttttattgcaatacaactgagataatatatagctactattgtacctt 18996
Query: 661 atcaacacttgaaatgtatccatcaaactaaatcatgaaaaaccatcgcccttatatatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18995 atcaacacttgaaatgtatccatcaaactaaatcatgaaaaaccatcgcccttatatatg 18936
Query: 721 atcataaaagatgaatattaatcaattcacgatatgacaggacgagaataaataattgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18935 atcataaaagatgaatattaatcaattcacgatatgacaggacgagaataaataattgca 18876
Query: 781 cttaattactagatggataattgatgttccagcgagttatctgactcattctaggcgatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18875 cttaattactagatggataattgatgttccagcgagttatctgactcattctaggcgatt 18816
Query: 841 tcagtaaacaagagtccctttctcccttggttcggtatcgatataa 886
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18815 tcagtaaacaagagtccctttctcccttggttcggtatcgatataa 18770
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7002
Number of Sequences: 1807
Number of extensions: 7002
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)